Publications at Yale

X. Cao*, A. Khitun*, Y. Luo, Z. Na, T. Phoodokmai, K. Sappakhaw, E. Olatunji, C. Uttamapinant, S. A. Slavoff. “Alt-RPL36 downregulates the PI3K-AKT-mTOR signaling pathway by interacting with TMEM24.” Nature Communications, 2021, 12(508). Open access

K. Sappakhaw, K. Jantarug, S. A. Slavoff, N. Israsena, C. Uttamapinant. “A genetic code expansion-derived molecular beacon for the detection of intracellular amyloid-beta peptide generation.” Angewandte Chemie International Edition2021, 60, 3934-3939. PMC

Y. Luo, J. Schofield, Z. Na, T. Hann, M. D. Simon, S. A. Slavoff. “Discovery of cellular substrates of human RNA decapping enzyme Dcp2 using a stapled bicyclic peptide inhibitor.” Cell Chemical Biology, 2021, 28(4):463-474.e7. Free featured article

Y. Luo*, J. Schofield*, M. D. Simon, S. A. Slavoff. “Global profiling of cellular substrates of human Dcp2.” Biochemistry2020, 59(43), 4176-4188. 

Z. Na*, Y. Luo*, J. A. Schofield, S. Smelyansky, A. Khitun, S. Muthukumar, E. Valkov, M. D. Simon, S. A. Slavoff. “The NBDY microprotein regulates cellular RNA decapping.” Biochemistry2020, 59(42), 4131-4142.

X. Cao*, A. Khitun*, Z. Na, D. Dumitrescu, M. Kubica, E. Olatunji, S. A. Slavoff. “Comparative proteomic profiling of unannotated microproteins and alternative proteins in human cell lines.” Journal of Proteome Research2020, 19(8), 3418-3426.

X. Cao, S. A. Slavoff. “Non-AUG start codons: Expanding and regulating the small and alternative ORFeome.” Experimental Cell Research, 2020, 391(1), 111973.

R. M. Brecht, C. C. Liu, H. A. Beilinson, A. Khitun, S. A. Slavoff, D. G. Schatz. “Nucleolar localization of RAG1 modulates V(D)J recombination activity.” Proceedings of the National Academy of Sciences, 2020, 117(8):4300-4309. PMC

A. Khitun, S. A. Slavoff. “Proteomic detection and validation of translated small open reading frames.” Current Protocols in Chemical Biology, 2019, 11(4):e77. PMC

A. Khitun*, T. Ness*, S. A. Slavoff. “Small open reading frames and cellular stress responses.” Molecular Omics, 2019, 15(2):108-116. PMC

R. Jackson, L. Kroehling, A. Khitun, W. Bailis, A. Jarret, A. G. York, O. M. Khan, J. R. Brewer, M. H. Skadow, C. Duizer, C. C. D. Harman, L. Chang, P. Bielecki, A. G. Solis, H. R. Steach, S. Slavoff, R. A. Flavell. “The translation of non-canonical open reading frames controls mucosal immunity.” Nature2018, 564(7736):434-438. PMC

Y. Luo*, Z. Na*, S. A. Slavoff. “P-bodies: composition, properties and functions.” Biochemistry, 201857(17): 2424-2431. PMC

R. Aebersold et al. “How many human proteoforms are there?” Nature Chemical Biology201814(3):206-214. PMC

P. Yuan, N. G. D’Lima, S. A. Slavoff. “Comparative membrane proteomics reveals a nonannotated E. coli heat shock protein.” Biochemistry, 2018, 57, 56-69. PMC

N. G. D’Lima*, A. Khitun*, A. D. Rosenbloom, P. Yuan, B. M. Gassaway, K. W. Barber, J. Rinehart, S. A. Slavoff. “Comparative proteomics enables identification of nonannotated cold shock proteins in E. coli.” Journal of Proteome Research, 2017, 13, 3722-3731. PMC

N. G. D’Lima, J. Ma, L. Winkler, Q. Chu, K. H. Loh, E. O. Corpuz, B. A. Budnik, J. Lykke-Andersen, A. Saghatelian, S. A. Slavoff. “A human microprotein that interacts with the mRNA decapping complex.” Nature Chemical Biology, 2017, 13, 174–180. PMC